Transcript: MIR3945HG:4

Basic information

LNCipedia transcript ID: MIR3945HG:4 
LNCipedia gene ID: MIR3945HG
Location (hg38): chr4:184843346-184853545
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1727 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008694; NONHSAT099567
Alternative gene names: XLOC_004208; linc-ACSL1-1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -21.5692 non-coding 
CPAT coding probability 3.90% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR3945HG:4 no no no no

Available literature

  1. Zhou (2015), A potential signature of eight long non-coding RNAs predicts survival in patients with non-small cell lung cancer., J Transl Med


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ACSL1-1:4
3.1 lnc-ACSL1-1:4
4.0 MIR3945HG:4
4.1 MIR3945HG:4
5.0 MIR3945HG:4
5.1 MIR3945HG:4
5.2 MIR3945HG:4