Transcript: MIR4422HG:4

Basic information

LNCipedia transcript ID: MIR4422HG:4 
HGNC Gene Symbol: MIR4422HG    
HGNC Full Gene Name: MIR4422 host gene
Ensembl Gene ID: ENSG00000231090
Ensembl Transcript ID: ENST00000451250
Location (hg38): chr1:55217861-55234177
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 638 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451250.1; RP11-101C11.1-001; OTTHUMT00000022545.1; NONHSAT003409
Alternative gene names: ENSG00000231090.1; RP11-101C11.1; OTTHUMG00000008214.1; MIR4422HG; ENSG00000231090.2


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -177.8112 non-coding 
CPAT coding probability 5.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4422HG:4 no no no no

Available literature

  1. Zhou (2017), Discovery and validation of immune-associated long non-coding RNA biomarkers associated with clinically molecular subtype and prognosis in diffuse large B cell lymphoma., Mol. Cancer


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCSK9-2:1
4.0 lnc-PCSK9-2:1
4.1 lnc-PCSK9-2:1
5.0 lnc-PCSK9-2:1
5.1 MIR4422HG:3
5.2 MIR4422HG:4