Transcript: MIR4432HG:7

Basic information

LNCipedia transcript ID: MIR4432HG:7 
LNCipedia gene ID: MIR4432HG
Ensembl Gene ID: ENSG00000228590
Ensembl Transcript ID: ENST00000457668
Location (hg38): chr2:60350595-60353016
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2005 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00003294; ENST00000457668; ENST00000457668.1; AC007381.3-001; OTTHUMT00000327027.1; NONHSAT070890
Alternative gene names: XLOC_002106; linc-FANCL-4; ENSG00000228590; AC007381.3; ENSG00000228590.1; OTTHUMG00000152619.1; ; AC007381.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -94.3394 non-coding 
CPAT coding probability 11.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR4432HG:7 no no no no

Available literature

  1. Ning (2014), SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BCL11A-4:1
3.1 lnc-BCL11A-4:1
4.0 lnc-BCL11A-4:1
4.1 MIR4432HG:7
5.0 MIR4432HG:7
5.1 MIR4432HG:7
5.2 MIR4432HG:7