Transcript: MIR548A1HG:9

Basic information

LNCipedia transcript ID: MIR548A1HG:9 
LNCipedia gene ID: MIR548A1HG
Location (hg38): chr6:18522755-18536031
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 265 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT147383
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -782.3981 non-coding 
CPAT coding probability 35.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR548A1HG:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RNF144B-1:2
4.0 lnc-RNF144B-1:2
4.1 lnc-RNF144B-1:2
5.0 lnc-RNF144B-1:2
5.1 MIR548A1HG:5
5.2 MIR548A1HG:9