Transcript: MIR548XHG:5

Basic information

LNCipedia transcript ID: MIR548XHG:5 
LNCipedia gene ID: MIR548XHG
Location (hg38): chr21:18561267-18738025
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 759 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT081311
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 8.8352 non-coding 
CPAT coding probability 3.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR548XHG:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMPRSS15-3:5
4.0 MIR548XHG:5
4.1 MIR548XHG:5
5.0 MIR548XHG:5
5.1 MIR548XHG:5
5.2 MIR548XHG:5