Transcript: MIR600HG:6

Basic information

LNCipedia transcript ID: MIR600HG:6 
LNCipedia gene ID: MIR600HG
Location (hg38): chr9:123109501-123111165
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1665 bp
Exons: 1
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000545631.1; MIR600HG-201; NONHSAT134615
Alternative gene names: ENSG00000236901.2; MIR600HG; OTTHUMG00000020635.2; ENSG00000236901.3; GL012; FLJ22161


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.2176 non-coding 
CPAT coding probability 21.31% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR600HG:6 no no no no

Available literature

  1. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-STRBP-1:2
4.0 MIR600HG:6
4.1 MIR600HG:6
5.0 MIR600HG:6
5.1 MIR600HG:6
5.2 MIR600HG:6