Transcript: MIR646HG:21

Basic information

LNCipedia transcript ID: MIR646HG:21 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60320837-60325258
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 869 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00028248; NONHSAT080656
Alternative gene names: XLOC_013591; linc-CDH4-4;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -7.4359 non-coding 
CPAT coding probability 3.79% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:21 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C20orf197-1:12
3.1 lnc-C20orf197-3:12
4.0 MIR646HG:21
4.1 MIR646HG:21
5.0 MIR646HG:21
5.1 MIR646HG:21
5.2 MIR646HG:21