Transcript: MIR646HG:25

Basic information

LNCipedia transcript ID: MIR646HG:25 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60138492-60322256
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2043 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228340.1|ENST00000432910.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -20.3357 non-coding 
CPAT coding probability 4.37% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:25 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIR646HG:25
5.0 MIR646HG:25
5.1 MIR646HG:25
5.2 MIR646HG:25