Transcript: MIR646HG:27

Basic information

LNCipedia transcript ID: MIR646HG:27 
LNCipedia gene ID: MIR646HG
Location (hg38): chr20:60138492-60326113
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6012 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228340.1|ENCT00000263192.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.9309 non-coding 
CPAT coding probability 3.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR646HG:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIR646HG:27
5.0 MIR646HG:27
5.1 MIR646HG:27
5.2 MIR646HG:27