Transcript: MIR663AHG:42

Basic information

LNCipedia transcript ID: MIR663AHG:42 
LNCipedia gene ID: MIR663AHG
Location (hg38): chr20:26187638-26209845
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 671 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227195.4|ENST00000596058.1
Alternative gene names: RP3-410C9.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -11.5551 non-coding 
CPAT coding probability 1.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR663AHG:42 no no no no

Available literature

  1. Rajpathak (2014), Human 45,X fibroblast transcriptome reveals distinct differentially expressed genes including long noncoding RNAs potentially associated with the pathophysiology of Turner syndrome., PLoS ONE


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MIR663AHG:42
5.0 MIR663AHG:42
5.1 MIR663AHG:42
5.2 MIR663AHG:42