Transcript: MIR670HG:29

Basic information

LNCipedia transcript ID: MIR670HG:29 
LNCipedia gene ID: MIR670HG
Location (hg38): chr11:43670470-43673382
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 397 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00019284
Alternative gene names: XLOC_009116; linc-HSD17B12-1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -173.4103 non-coding 
CPAT coding probability 1.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR670HG:29 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TTC17-1:2
3.1 lnc-TTC17-1:2
4.0 lnc-HSD17B12-1:9
4.1 lnc-HSD17B12-1:9
5.0 lnc-HSD17B12-1:9
5.1 MIR670HG:18
5.2 MIR670HG:29