Transcript: MIR762HG:5

Basic information

LNCipedia transcript ID: MIR762HG:5 
HGNC Gene Symbol: MIR762HG    
HGNC Full Gene Name: MIR762 host gene
Ensembl Gene ID: ENSG00000260083
Ensembl Transcript ID: ENST00000564901
Location (hg38): chr16:30875461-30895080
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 648 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564901.1; MIR4519-003; OTTHUMT00000433714.1; NONHSAT141821
Alternative gene names: ENSG00000260083.1; MIR4519; OTTHUMG00000176766.2; MIR762HG;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -210.0109 non-coding 
CPAT coding probability 2.76% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIR762HG:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CTF1-1:2
4.0 MIR762HG:5
4.1 MIR762HG:5
5.0 MIR762HG:5
5.1 MIR762HG:5
5.2 MIR762HG:5