Transcript: MIRLET7BHG:11

Basic information

LNCipedia transcript ID: MIRLET7BHG:11 
HGNC Gene Symbol: MIRLET7BHG    
HGNC Full Gene Name: MIRLET7B host gene
Ensembl Gene ID: ENSG00000197182
Ensembl Transcript ID: ENST00000360737
Location (hg38): chr22:46086003-46113928
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 4560 bp
Exons: 5
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000360737.4
Alternative gene names: ENSG00000197182.12; MIRLET7BHG; ENSG00000197182.13; ENSG00000197182.14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 38.4051 non-coding 
CPAT coding probability 55.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MIRLET7BHG:11 no no no no

Available literature

  1. Sauvageau (2013), Multiple knockout mouse models reveal lincRNAs are required for life and brain development., Elife
  2. Bakin (2004), Cytoplasmic sequestration of HDAC7 from mitochondrial and nuclear compartments upon initiation of apoptosis., J. Biol. Chem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RP4-695O20__B.10.1-3:12
4.1 lnc-RP4-695O20__B.10.1-3:12
5.0 lnc-RP4-695O20__B.10.1-3:12
5.1 MIRLET7BHG:6
5.2 MIRLET7BHG:11