Transcript: MIRLET7DHG:4

Basic information

LNCipedia transcript ID: MIRLET7DHG:4 
HGNC Gene Symbol: MIRLET7DHG    
HGNC Full Gene Name: MIRLET7D host gene
Ensembl Gene ID: ENSG00000230262
Ensembl Transcript ID: ENST00000416309
Location (hg38): chr9:94176602-94204543
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1294 bp
Exons: 4
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000416309.2; ENST00000416309.6
Alternative gene names: ENSG00000230262.2; MIRLET7DHG; ENSG00000230262.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.6346 non-coding 
CPAT coding probability 1.49% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIRLET7DHG:4 no no no no

Available literature

  1. Rodriguez (2004), Identification of mammalian microRNA host genes and transcription units., Genome Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM22F-1:5
4.0 MIRLET7DHG:4
4.1 MIRLET7DHG:4
5.0 MIRLET7DHG:4
5.1 MIRLET7DHG:4
5.2 MIRLET7DHG:4