Transcript: MKX-AS1:4

Basic information

LNCipedia transcript ID: MKX-AS1:4 
LNCipedia gene ID: MKX-AS1
Location (hg38): chr10:27761589-27767880
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1024 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT011913; FPKM1_group_3055_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.4285 non-coding 
CPAT coding probability 0.69% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MKX-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAB18-1:3
4.0 MKX-AS1:4
4.1 MKX-AS1:4
5.0 MKX-AS1:4
5.1 MKX-AS1:4
5.2 MKX-AS1:4