Transcript: MME-AS1:1

Basic information

LNCipedia transcript ID: MME-AS1:1 
LNCipedia gene ID: MME-AS1
Location (hg38): chr3:155158741-155183285
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 457 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000484721.1; MME-AS1-001; OTTHUMT00000351091.1; NONHSAT092819
Alternative gene names: ENSG00000240666.1; MME-AS1; OTTHUMG00000158456.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -383.6319 non-coding 
CPAT coding probability 11.65% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MME-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PLCH1-2:1
4.0 MME-AS1:1
4.1 MME-AS1:1
5.0 MME-AS1:1
5.1 MME-AS1:1
5.2 MME-AS1:1