Transcript: MMP25-AS1:18

Basic information

LNCipedia transcript ID: MMP25-AS1:18 
LNCipedia gene ID: MMP25-AS1
Location (hg38): chr16:3057729-3058229
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 399 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT147944
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -38.3612 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MMP25-AS1:18 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC64B-1:19
4.0 MMP25-AS1:18
4.1 MMP25-AS1:18
5.0 MMP25-AS1:18
5.1 MMP25-AS1:18
5.2 MMP25-AS1:18