Transcript: MMP25-AS1:2

Basic information

LNCipedia transcript ID: MMP25-AS1:2 
LNCipedia gene ID: MMP25-AS1
Location (hg38): chr16:3053453-3075589
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1607 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT147934
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3919 non-coding 
CPAT coding probability 98.95% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MMP25-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CCDC64B-1:10
4.0 MMP25-AS1:2
4.1 MMP25-AS1:2
5.0 MMP25-AS1:2
5.1 MMP25-AS1:2
5.2 MMP25-AS1:2