Transcript: MPRIP-AS1:1

Basic information

LNCipedia transcript ID: MPRIP-AS1:1 
HGNC Gene Symbol: MPRIP-AS1    
HGNC Full Gene Name: MPRIP antisense RNA 1
Ensembl Gene ID: ENSG00000225442
Ensembl Transcript ID: ENST00000428367
Location (hg38): chr17:17076038-17077752
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1058 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000428367.2; MPRIP-AS1-001; OTTHUMT00000131601.2; NONHSAT146042
Alternative gene names: ENSG00000225442.2; MPRIP-AS1; OTTHUMG00000059279.2;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 11.4733 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MPRIP-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TNFRSF13B-4:1
4.0 MPRIP-AS1:1
4.1 MPRIP-AS1:1
5.0 MPRIP-AS1:1
5.1 MPRIP-AS1:1
5.2 MPRIP-AS1:1