Transcript: MRPL23-AS1:2

Basic information

LNCipedia transcript ID: MRPL23-AS1:2 
LNCipedia gene ID: MRPL23-AS1
Location (hg38): chr11:1983210-1989920
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1903 bp
Exons: 4
Sources: Broad Institute
Alternative transcript names: TCONS_00019081
Alternative gene names: XLOC_009356; linc-CTSD-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -10.3239 non-coding 
CPAT coding probability 51.18% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MRPL23-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C11orf89-1:1
3.1 lnc-C11orf89-1:2
4.0 MRPL23-AS1:2
4.1 MRPL23-AS1:2
5.0 MRPL23-AS1:2
5.1 MRPL23-AS1:2
5.2 MRPL23-AS1:2