Transcript: MRPL23-AS1:6

Basic information

LNCipedia transcript ID: MRPL23-AS1:6 
LNCipedia gene ID: MRPL23-AS1
Location (hg38): chr11:1983698-1986371
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2214 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00019560; NONHSAT017454
Alternative gene names: XLOC_009356; linc-CTSD-3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 6.1631 non-coding 
CPAT coding probability 87.19% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MRPL23-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-C11orf89-1:3
3.1 lnc-C11orf89-1:4
4.0 MRPL23-AS1:6
4.1 MRPL23-AS1:6
5.0 MRPL23-AS1:6
5.1 MRPL23-AS1:6
5.2 MRPL23-AS1:6