Transcript: MUC5B-AS1:4

Basic information

LNCipedia transcript ID: MUC5B-AS1:4 
HGNC Gene Symbol: MUC5B-AS1    
HGNC Full Gene Name: MUC5B antisense RNA 1
Ensembl Gene ID: ENSG00000255177
Ensembl Transcript ID: ENST00000532061
Location (hg38): chr11:1242261-1249676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 434 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT017387; ENST00000532061.2
Alternative gene names: ENSG00000255177.2; RP11-532E4.2; AC061979.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.8023 non-coding 
CPAT coding probability 9.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MUC5B-AS1:4 yes no no no

Available literature

  1. Yuan (2018), Long non-coding RNA MUC5B-AS1 promotes metastasis through mutually regulating MUC5B expression in lung adenocarcinoma., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOLLIP-1:2
4.0 lnc-TOLLIP-1:2
4.1 lnc-TOLLIP-1:2
5.0 lnc-TOLLIP-1:2
5.1 MUC5B-AS1:2
5.2 MUC5B-AS1:4