Transcript: MUC5B-AS1:5

Basic information

LNCipedia transcript ID: MUC5B-AS1:5 
LNCipedia gene ID: MUC5B-AS1
Location (hg38): chr11:1242296-1247997
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 391 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000532061.1; RP11-532E4.2-001; OTTHUMT00000390839.1; NONHSAT017388
Alternative gene names: ENSG00000255177.1; RP11-532E4.2; OTTHUMG00000166615.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -166.8023 non-coding 
CPAT coding probability 9.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MUC5B-AS1:5 yes no no no

Available literature

  1. Yuan (2018), Long non-coding RNA MUC5B-AS1 promotes metastasis through mutually regulating MUC5B expression in lung adenocarcinoma., Cell Death Dis


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TOLLIP-1:1
4.0 lnc-TOLLIP-1:1
4.1 lnc-TOLLIP-1:1
5.0 lnc-TOLLIP-1:1
5.1 MUC5B-AS1:3
5.2 MUC5B-AS1:5