Transcript: MYB-AS1:2

Basic information

LNCipedia transcript ID: MYB-AS1:2 
LNCipedia gene ID: MYB-AS1
Location (hg38): chr6:135216705-135236211
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 578 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT115075
Alternative gene names: RP1-32B1.3; NCRNA00209


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.208 non-coding 
CPAT coding probability 3.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MYB-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AHI1-1:2
4.0 MYB-AS1:2
4.1 MYB-AS1:2
5.0 MYB-AS1:2
5.1 MYB-AS1:2
5.2 MYB-AS1:2