Transcript: MYB-AS1:3

Basic information

LNCipedia transcript ID: MYB-AS1:3 
HGNC Gene Symbol: MYB-AS1    
HGNC Full Gene Name: MYB antisense RNA 1
Ensembl Gene ID: ENSG00000236703
Ensembl Transcript ID: ENST00000455534
Location (hg38): chr6:135195083-135195995
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 449 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000455534.1; MYB-AS1-001; OTTHUMT00000042345.2; NONHSAT115070
Alternative gene names: ENSG00000236703.1; MYB-AS1; OTTHUMG00000015627.2; RP1-32B1.3; NCRNA00209


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 170.3156 coding 
CPAT coding probability 0.91% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MYB-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AHI1-1:1
4.0 MYB-AS1:3
4.1 MYB-AS1:3
5.0 MYB-AS1:3
5.1 MYB-AS1:3
5.2 MYB-AS1:3