Transcript: MYO16-AS1:2

Basic information

LNCipedia transcript ID: MYO16-AS1:2 
LNCipedia gene ID: MYO16-AS1
RefSeq ID: NR_047700
Location (hg38): chr13:109163905-109167303
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 547 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT140145; NR_047700; NR_047700.1
Alternative gene names: ; MYO16-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.6555 non-coding 
CPAT coding probability 0.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MYO16-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRS2-2:2
4.0 MYO16-AS1:2
4.1 MYO16-AS1:2
5.0 MYO16-AS1:2
5.1 MYO16-AS1:2
5.2 MYO16-AS1:2