Transcript: NARF-AS1:3

Basic information

LNCipedia transcript ID: NARF-AS1:3 
HGNC Gene Symbol: NARF-AS1    
HGNC Full Gene Name: NARF antisense RNA 1
Ensembl Gene ID: ENSG00000266445
Ensembl Transcript ID: ENST00000582249
Location (hg38): chr17:82476597-82477924
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 838 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000582249.1; RP13-991F5.2-001; OTTHUMT00000443525.1; NONHSAT056716
Alternative gene names: ENSG00000266445.1; RP13-991F5.2; OTTHUMG00000178839.1; AC124287.1; NARF-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.9164 non-coding 
CPAT coding probability 0.92% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NARF-AS1:3 yes no no no

Available literature

  1. Deng (2017), Long noncoding RNA expression profiles in sub-lethal heat-treated hepatoma carcinoma cells., World J Surg Oncol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C17orf62-2:1
4.0 lnc-C17orf62-2:1
4.1 lnc-C17orf62-2:1
5.0 lnc-C17orf62-2:1
5.1 NARF-AS1:2
5.2 NARF-AS1:3