Transcript: NCAM1-AS1:5

Basic information

LNCipedia transcript ID: NCAM1-AS1:5 
LNCipedia gene ID: NCAM1-AS1
Location (hg38): chr11:113267851-113269723
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1873 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT024238
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -100.3148 non-coding 
CPAT coding probability 12.29% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NCAM1-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DRD2-2:5
4.0 NCAM1-AS1:5
4.1 NCAM1-AS1:5
5.0 NCAM1-AS1:5
5.1 NCAM1-AS1:5
5.2 NCAM1-AS1:5