Transcript: NCF4-AS1:12

Basic information

LNCipedia transcript ID: NCF4-AS1:12 
HGNC Gene Symbol: NCF4-AS1    
HGNC Full Gene Name: NCF4 antisense RNA 1
Ensembl Gene ID: ENSG00000183822
Ensembl Transcript ID: ENST00000619915
Location (hg38): chr22:36847372-36870441
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 995 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000330602.2; CTA-833B7.2-001; OTTHUMT00000318868.1; NONHSAT085132; ENST00000619915.1
Alternative gene names: ENSG00000183822.2; CTA-833B7.2; OTTHUMG00000150550.1; ENSG00000183822.3; NCF4-AS1

RNA sequence:


Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -66.724 non-coding 
CPAT coding probability 21.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NCF4-AS1:12 no no no no

Available literature

  1. Wang (2017), Differential expression profile of long noncoding RNAs in human chorionic villi of early recurrent miscarriage., Clin. Chim. Acta

LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PVALB-1:1
4.0 lnc-PVALB-1:1
4.1 lnc-PVALB-1:1
5.0 lnc-PVALB-1:1
5.1 NCF4-AS1:6
5.2 NCF4-AS1:12