Transcript: NDFIP2-AS1:4

Basic information

LNCipedia transcript ID: NDFIP2-AS1:4 
LNCipedia gene ID: NDFIP2-AS1
Location (hg38): chr13:79422008-79429451
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1079 bp
Exons: 4
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00022061; NONHSAT034485
Alternative gene names: XLOC_010666; linc-RBM26-5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -20.233 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NDFIP2-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RBM26-1:1
3.1 lnc-RBM26-1:1
4.0 lnc-RBM26-1:1
4.1 NDFIP2-AS1:4
5.0 NDFIP2-AS1:4
5.1 NDFIP2-AS1:4
5.2 NDFIP2-AS1:4