Transcript: NDST1-AS1:11

Basic information

LNCipedia transcript ID: NDST1-AS1:11 
LNCipedia gene ID: NDST1-AS1
Location (hg38): chr5:150475516-150485261
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 277 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00010532
Alternative gene names: XLOC_005052; linc-RPS14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -263.3135 non-coding 
CPAT coding probability 0.42% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NDST1-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPS14-1:3
3.1 lnc-RPS14-1:3
4.0 lnc-RPS14-1:3
4.1 lnc-RPS14-1:3
5.0 lnc-RPS14-1:3
5.1 NDST1-AS1:6
5.2 NDST1-AS1:11