Transcript: NDST1-AS1:8

Basic information

LNCipedia transcript ID: NDST1-AS1:8 
LNCipedia gene ID: NDST1-AS1
Location (hg38): chr5:150475673-150486023
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 281 bp
Exons: 3
Sources: Broad Institute
Alternative transcript names: TCONS_00011069
Alternative gene names: XLOC_005052; linc-RPS14


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -202.1254 non-coding 
CPAT coding probability 1.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NDST1-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RPS14-1:1
3.1 lnc-RPS14-1:1
4.0 lnc-RPS14-1:1
4.1 lnc-RPS14-1:1
5.0 lnc-RPS14-1:1
5.1 NDST1-AS1:3
5.2 NDST1-AS1:8