Transcript: NDUFA6-DT:46

Basic information

LNCipedia transcript ID: NDUFA6-DT:46 
LNCipedia gene ID: NDUFA6-DT
RefSeq ID: NR_034118
Location (hg38): chr22:42090933-42125349
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1658 bp
Exons: 5
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT147221; NR_034118; NR_034118.2
Alternative gene names: ; NDUFA6-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -75.8787 non-coding 
CPAT coding probability 44.75% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NDUFA6-DT:46 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM109B-1:11
4.0 NDUFA6-AS1:7
4.1 NDUFA6-AS1:7
5.0 NDUFA6-AS1:7
5.1 NDUFA6-DT:10
5.2 NDUFA6-DT:46