Transcript: NDUFA6-DT:56

Basic information

LNCipedia transcript ID: NDUFA6-DT:56 
LNCipedia gene ID: NDUFA6-DT
Location (hg38): chr22:42090956-42137501
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1521 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012
Alternative transcript names: ENST00000536447.1; RP4-669P10.18-004; OTTHUMT00000322152.1
Alternative gene names: ENSG00000237037.3; RP4-669P10.18; OTTHUMG00000150917.3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -23.1758 non-coding 
CPAT coding probability 27.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NDUFA6-DT:56 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FAM109B-1:2
4.0 NDUFA6-AS1:8
4.1 NDUFA6-AS1:8
5.0 NDUFA6-AS1:8
5.1 NDUFA6-DT:20
5.2 NDUFA6-DT:56