Transcript: NFIA-AS2:11

Basic information

LNCipedia transcript ID: NFIA-AS2:11 
LNCipedia gene ID: NFIA-AS2
Location (hg38): chr1:60940239-60970740
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1239 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000237928.1|ENST00000438559.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -84.441 non-coding 
CPAT coding probability 0.97% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFIA-AS2:11 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NFIA-AS2:11
5.0 NFIA-AS2:11
5.1 NFIA-AS2:11
5.2 NFIA-AS2:11