Transcript: NFYC-AS1:1

Basic information

LNCipedia transcript ID: NFYC-AS1:1 
LNCipedia gene ID: NFYC-AS1
RefSeq ID: NR_024567
Location (hg38): chr1:40689080-40692261
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3182 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT002658; NR_024567; NR_024567.1
Alternative gene names: 0808y08y; NFYC-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -63.599 non-coding 
CPAT coding probability 34.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFYC-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIMS3-6:1
4.0 NFYC-AS1:1
4.1 NFYC-AS1:1
5.0 NFYC-AS1:1
5.1 NFYC-AS1:1
5.2 NFYC-AS1:1