Transcript: NFYC-AS1:2

Basic information

LNCipedia transcript ID: NFYC-AS1:2 
HGNC Gene Symbol: NFYC-AS1    
HGNC Full Gene Name: NFYC antisense RNA 1
Ensembl Gene ID: ENSG00000272145
Ensembl Transcript ID: ENST00000606277
Location (hg38): chr1:40690380-40692066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1687 bp
Exons: 1
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000606277.1
Alternative gene names: ENSG00000272145.1; NFYC-AS1; 0808y08y


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.9299 non-coding 
CPAT coding probability 36.12% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFYC-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RIMS3-6:2
4.0 NFYC-AS1:2
4.1 NFYC-AS1:2
5.0 NFYC-AS1:2
5.1 NFYC-AS1:2
5.2 NFYC-AS1:2