Transcript: NFYC-AS1:4

Basic information

LNCipedia transcript ID: NFYC-AS1:4 
LNCipedia gene ID: NFYC-AS1
Location (hg38): chr1:40685326-40692066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2388 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272145.1|MICT00000008853.1
Alternative gene names: 0808y08y


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 30.8847 non-coding 
CPAT coding probability 0.30% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFYC-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NFYC-AS1:4
5.0 NFYC-AS1:4
5.1 NFYC-AS1:4
5.2 NFYC-AS1:4