Transcript: NFYC-AS1:5

Basic information

LNCipedia transcript ID: NFYC-AS1:5 
LNCipedia gene ID: NFYC-AS1
Location (hg38): chr1:40690380-40692066
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1687 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000272145.1|ENST00000606277.1
Alternative gene names: 0808y08y


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -131.9299 non-coding 
CPAT coding probability 24.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFYC-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NFYC-AS1:5
5.0 NFYC-AS1:5
5.1 NFYC-AS1:5
5.2 NFYC-AS1:5