Transcript: NFYC-AS1:6

Basic information

LNCipedia transcript ID: NFYC-AS1:6 
LNCipedia gene ID: NFYC-AS1
Location (hg38): chr1:40685352-40688074
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2723 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1506:1
Alternative gene names: 0808y08y


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 24.5169 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NFYC-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-RIMS3-1:3
4.1 NFYC-AS1:6
5.0 NFYC-AS1:6
5.1 NFYC-AS1:6
5.2 NFYC-AS1:6