Transcript: NHS-AS1:1

Basic information

LNCipedia transcript ID: NHS-AS1:1 
LNCipedia gene ID: NHS-AS1
RefSeq ID: NR_046632
Location (hg38): chrX:17552349-17559127
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 383 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046632; NR_046632.1
Alternative gene names: ; NHS-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -95.0249 non-coding 
CPAT coding probability 0.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NHS-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RAI2-1:2
4.0 NHS-AS1:1
4.1 NHS-AS1:1
5.0 NHS-AS1:1
5.1 NHS-AS1:1
5.2 NHS-AS1:1