Transcript: NOP14-AS1:15

Basic information

LNCipedia transcript ID: NOP14-AS1:15 
LNCipedia gene ID: NOP14-AS1
Location (hg38): chr4:2934916-2937841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1440 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000249673.2|FTMT21500014085.1
Alternative gene names: RES4-24


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.8625 non-coding 
CPAT coding probability 1.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NOP14-AS1:15 no no no no

Available literature

  1. Hadano (1998), The primary structure and genomic organization of five novel transcripts located close to the Huntington's disease gene on human chromosome 4p16.3., DNA Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NOP14-AS1:15
5.0 NOP14-AS1:15
5.1 NOP14-AS1:15
5.2 NOP14-AS1:15