Transcript: NOP53-AS1:3

Basic information

LNCipedia transcript ID: NOP53-AS1:3 
HGNC Gene Symbol: NOP53-AS1    
HGNC Full Gene Name: NOP53 antisense RNA 1
Ensembl Gene ID: ENSG00000269656
Ensembl Transcript ID: ENST00000602048
RefSeq ID: NR_132382
Location (hg38): chr19:47757036-47768840
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 540 bp
Exons: 3
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT066992; ENST00000602048.1; NR_132382.1
Alternative gene names: ENSG00000269656.1; CTD-2571L23.6; GLTSCR2-AS1; ; NOP53-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -283.3679 non-coding 
CPAT coding probability 14.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NOP53-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TPRX1-2:1
4.0 GLTSCR2-AS1:1
4.1 GLTSCR2-AS1:1
5.0 GLTSCR2-AS1:1
5.1 NOP53-AS1:2
5.2 NOP53-AS1:3