Transcript: NRG1-IT1:10

Basic information

LNCipedia transcript ID: NRG1-IT1:10 
HGNC Gene Symbol: NRG1-IT1    
HGNC Full Gene Name: NRG1 intronic transcript 1
Ensembl Gene ID: ENSG00000253974
Ensembl Transcript ID: ENST00000523785
Location (hg38): chr8:32136661-32139475
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 352 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000523785.1; NRG1-IT1-004; OTTHUMT00000376705.1; NONHSAT125931
Alternative gene names: ENSG00000253974.1; NRG1-IT1; OTTHUMG00000163966.2; ENSG00000253974.5;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -221.2604 non-coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NRG1-IT1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-WRN-7:4
4.0 NRG1-IT1:10
4.1 NRG1-IT1:10
5.0 NRG1-IT1:10
5.1 NRG1-IT1:10
5.2 NRG1-IT1:10