Transcript: NRG3-AS1:3

Basic information

LNCipedia transcript ID: NRG3-AS1:3 
HGNC Gene Symbol: NRG3-AS1    
HGNC Full Gene Name: NRG3 antisense RNA 1
Ensembl Gene ID: ENSG00000225738
Ensembl Transcript ID: ENST00000448936
Location (hg38): chr10:82230130-82232919
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 555 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000448936.2; NRG3-AS1-001; OTTHUMT00000049101.2; NONHSAT015285
Alternative gene names: ENSG00000225738.2; NRG3-AS1; OTTHUMG00000018624.2; Em:AC010157.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -237.3096 non-coding 
CPAT coding probability 5.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NRG3-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DYDC1-4:2
4.0 NRG3-AS1:3
4.1 NRG3-AS1:3
5.0 NRG3-AS1:3
5.1 NRG3-AS1:3
5.2 NRG3-AS1:3