Transcript: NTM-IT:1

Basic information

LNCipedia transcript ID: NTM-IT:1 
HGNC Gene Symbol: NTM-IT    
HGNC Full Gene Name: NTM intronic transcript
Ensembl Gene ID: ENSG00000238262
Ensembl Transcript ID: ENST00000421651
Location (hg38): chr11:132284302-132285081
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 373 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421651.1; NTM-IT3-001; OTTHUMT00000316006.1; NONHSAT140044
Alternative gene names: ENSG00000238262.1; NTM-IT3; OTTHUMG00000150047.1; NTM-IT;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.6841 non-coding 
CPAT coding probability 16.70% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NTM-IT:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf44-3:1
4.0 NTM-IT:1
4.1 NTM-IT:1
5.0 NTM-IT:1
5.1 NTM-IT:1
5.2 NTM-IT:1