Transcript: NTM-IT:2

Basic information

LNCipedia transcript ID: NTM-IT:2 
LNCipedia gene ID: NTM-IT
RefSeq ID: NR_046820
Location (hg38): chr11:132284302-132288459
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 764 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT025192; NR_046820; NR_046820.1
Alternative gene names: ; NTM-IT


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.6841 non-coding 
CPAT coding probability 2.54% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
NTM-IT:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C11orf44-3:2
4.0 NTM-IT:2
4.1 NTM-IT:2
5.0 NTM-IT:2
5.1 NTM-IT:2
5.2 NTM-IT:2