Transcript: NUP50-DT:34

Basic information

LNCipedia transcript ID: NUP50-DT:34 
LNCipedia gene ID: NUP50-DT
Location (hg38): chr22:45133829-45163837
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 1230 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT087203
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 71.937 coding 
CPAT coding probability 39.93% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NUP50-DT:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KIAA0930-2:5
4.0 NUP50-AS1:6
4.1 NUP50-AS1:6
5.0 NUP50-AS1:6
5.1 NUP50-DT:7
5.2 NUP50-DT:34