Transcript: NUP50-DT:47

Basic information

LNCipedia transcript ID: NUP50-DT:47 
LNCipedia gene ID: NUP50-DT
Location (hg38): chr22:45138857-45163714
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 257 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000226328.2|FTMT28500013256.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 71.937 coding 
CPAT coding probability 2.26% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NUP50-DT:47 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 NUP50-AS1:26
5.0 NUP50-AS1:26
5.1 NUP50-DT:20
5.2 NUP50-DT:47