Transcript: NUTM2B-AS1:10

Basic information

LNCipedia transcript ID: NUTM2B-AS1:10 
LNCipedia gene ID: NUTM2B-AS1
Location (hg38): chr10:79804485-79826516
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 624 bp
Exons: 5
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: ENST00000470445; ENST00000470445.1; RP11-773D16.1-001; OTTHUMT00000048998.1; NONHSAT015186
Alternative gene names: ENSG00000225484; RP11-773D16.1; ENSG00000225484.2; OTTHUMG00000018585.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score 37.8383 non-coding 
CPAT coding probability 32.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
NUTM2B-AS1:10 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SFTPD-2:2
3.1 lnc-SFTPD-2:2
4.0 NUTM2B-AS1:10
4.1 NUTM2B-AS1:10
5.0 NUTM2B-AS1:10
5.1 NUTM2B-AS1:10
5.2 NUTM2B-AS1:10